Welcome to mirtop’s documentation!

Contents:

• Logo competition
• Installation
  • bioconda
  • pypi
  • update to develop version from pip
  • install develop version
• Quick Start
  • Importer
  • Operations
  • Export
• Output
  • GFF command
  • Stats command
  • Compare command
  • Counts command
  • Export command
• Structure of the code
• Examples of contributions
  • How to add a new sub-command
  • Add a unit test
  • for the internal function
  • for the sub-command
  • test the unit
• Documentation for the Code
  • bam
  • exporter
  • gff
  • importer
  • libs
  • mirna
  • classes